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In contrast the linker in SmTAL2 is only five residues long (Gly-67 to Asn-71).
An α-helix was defined to be at least five residues long in a coiled or spiral conformation.
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Enantiopure N,N′-linked oligoureas as short as seven residues long have been previously shown to fold into a stable helical structure, stabilized by 12- and 14-membered H-bonded rings.
The loop L14 in Mtb structure is only three residues long and is devoid of the tyrosine residue Y227 (Figure 3).
These segments are approximately fifteen residues long and are encoded by clusters of infrequently-used codons [22], [31] that are separated by 1 10 codons [23].
FATCAT breaks the proteins to be aligned into fragments eight residues long (aligned fragment pairs [AFPs]).
Minimal core CD4+ T cell epitopes are typically eight or nine residues long, but lengths for optimal T cell stimulation may be longer and vary between subjects.
The predicted chloroplast targeting signal of PtrTRZ2 is unusual in that it is only seven residues long since the majority of the known chloroplast targeting signals consist of N-terminal 20-80 acido acid residues [ 53].
It was observed that some of these PTDs, mainly the Tat PTD and seven or nine residues long polyarginine motifs, caused association of the hybrid proteins with cells, but none of these constructs were delivered to the cytosol.
In this example, we selected a list of eighteen peptide sequences each fifteen residues long derived from the libraries of random linear peptides 40 and mapped them onto the surface of SARS Coronavirus Spike protein receptor binding domain 2 (PDB id: 2AJF).
Fifteen residue long fragment libraries are constructed using the secondary structure prediction method PREDICT, and fragments in these libraries are assembled to generate full-length chains of a query protein.
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