Sentence examples for first base of the transcript from inspiring English sources
Most strikingly the TSS are commonly defined by the dinucleotide CA (49% of 'tight' TSS), with A as the first base of the transcript.
The U6 promoter requires the first base of the transcript to be a guanine, so this either constitutes the first base of the target sequence, or can be appended to it.
Besides differential gene expression analysis, the identification of transcription start sites (TSSs) can be improved by using 5′-enriched RNA-Seq datasets (Sharma et al., 2010), which contain only the first bases of the sequenced transcripts.
With this option, the software attempts to design the probe within the first 1000 bases of the transcript.
The variant causes the complete deletion of the entire LAMC2 exon 1 containing the start codon and the first 79 coding bases of the transcript.
After initial coding, codes were added and refined based on a second reading of the transcripts and a codebook was created.
Base pair positions of the transcript first (5') and last (3') nucleotides are compared with the QTL base pair positions on the respective chromosome.
One, for transcripts d/e, is nested from the second exon of the longest transcripts, transcripts b/c.
First, based on the availability of sequenced genomes and large databases of sequenced transcripts (ESTs and cDNAs), alternative splicing events may be searched through reciprocal transcript alignments and alignments to genomic sequences.
The MD OCT-pool cDNA library was run twice due to low read and base numbers of the first run, and the transcript-tags of these two runs and of the run following the normalization approach (see above) were combined for all subsequent data analysis.
