Sentence examples for first alignments from inspiring English sources

First, alignments caused by short repetitive sequences were removed using a custom depth/coverage filter.

First, alignments must be estimated, and these can be difficult for some datasets with many insertions and deletions.

First, alignments reconstructed from wrong guide-trees carry phylogenetic information pointing towards that wrong topology (Supplementary Fig. S5).

First, alignments were generated for each pair of paralogous sequences and for each singleton locus along the duplicated region, in combination with their T. congolense homologs.

For instance, the second split-alignment resulted in only 1-41-4% increased mapped reads compared with first alignments; however, the mapped mismatches were increased 20%-30 20%-30fferent samples.

To improve alignments, we calculated ML guide trees from the first alignments using RAxML v. 7.7.5 (Stamatakis 2006) with a WAG+Γ model, and then repeated alignments with the new guide trees.

BWA alignments were performed using the bwa aln command with options –n 1, −o 0, and –e 0 and bwa samse with option –n 4. When doing a second alignment, the customized reference was updated, if necessary, to contain one of the alleles at predicted heterozygous sites from the first alignment, sequences were aligned, and the alignments were filtered as before.

"Hold strong in that first alignment," he said.

Common devices used in the first alignment turns are collaborative completion and repetition of the elements of the prior turn, but alliances can also be initiated through non-verbal devices such as head-shakes.

First, alignment between curriculum guidelines and teaching practices could be greatly improved if new guidelines were to become more adaptable in terms of Rogers' (2003) five perceived characteristics of innovations.

The first alignment is based on NAST which removes non-16S pyrotags in the returned alignment.