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Exact(17)
Since all the introns have been spliced out, the reads left in the first stage can be aligned against these sequences to find the alignment over intron/exon boundaries.
"There are some things where it is harder to find the alignment," he concedes.
Shape-it can find the alignment of molecules which maximizes their volume overlap.
Two-stage optimization Locate stations first to maximize the demand, then find the alignment to minimize the cost.
To find the alignment of every new image, we use all the available images in the mosaic that have intersection with the new image instead of using only the previous one.
Expertise matching, which aims to find the alignment between experts and queries, is a common problem in many applications such as conference paper reviewer assignment, product reviewer alignment, and product-endorser matching.
Similar(41)
They find the alignments with much higher biological similarity at the cost of slightly lower structural similarity than MI-GRAAL, while the biological similarity scores are even comparable to the BLAST based methods.
We have investigated the utility of using the ProtDeform algorithm to automatically find the alignments that expert hands define as most likely, and to recognize domains with the same CATH homology and topology.
The proposed registration method finds the alignment by maximizing the similarity score between a probe and a gallery image.
In other words, when a hit is found, the alignment perfectly matches the standard BLASTP alignment.
Where multiple alignments were found, the alignment that covered the longest portion of the probeset sequence was chosen.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com