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Such filtering was conducted using phylogenetic analysis [ 11] or sequence similarity searches [ 12].
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If the image filtering is conducted using the guided filter approach, the filtered image has the characteristics of the guided image.
Hybridization of the DNA probe with high-density BAC filters was conducted using the enhanced chemiluminescence system (ECL, Amersham).
The elemental analyses for the PM2.5 filters were conducted using X-ray fluorescence at the Desert Research Institute.
Low pass filtering (1-hr cut-off) of raw data was conducted using a Butterworth zero-phase filter (Butterworth, 1930) in Matlab.
Manual annotation was conducted using all JGI filtered gene models of H. irregulare, which includes gene models selected manually as the best representative model available for each gene.
Syringe filtration was conducted using Minisart RC syringe filters (hydrophilic, 0.2 μm, Sartorius Stedim Biotech GmbH, Goettingen, Germany).
UV photography was conducted using a Baader U-filter.
Our trial was conducted using the AN69 polyacryonitrile filter, which has unique adsorptive characteristics [ 14].
Quality filtering of raw reads and demultiplexing based on barcode was conducted using process_radtags.
Variant calling was conducted using SAMtools and SNPs were filtered via samtools.pl (varFilter -d 20 -D 5000).
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