Sentence examples for files were transformed from inspiring English sources

Alignment bam files were transformed into read coverage files (bigwig format) using deepTools79 with the RPKM (Reads Per Kilobase per Million mapped reads) normalization method.

FCS files were transformed into csv format by flowjo program.

Scanned images (DAT files) were transformed into intensities (CEL files) by GCOS (Affymetrix).

Finally, all sound files were transformed into wave files for stimulation in the scanner (using WaveLab, Steinberg).

In brief, IDAT files were transformed into intensity (beta) values.

All microarray raw data (cel files) were transformed using the Robust Multichip Average (RMA) normalization algorithm.

In the advanced analysis step {4}, these compatible files are transformed into vector form for the advanced check.

Once uploaded, the RTS files are transformed into a RTS model and all the associated assets (e.g., the final PRISM files) of each state are conveniently generated and stored in the storage centre.

These TIFF files are transformed into text files that contain fluorescence intensities for each gene.

The recorded wave file was transformed to the frequency domain using STFT.

The phenotype file is transformed to fit the format required by the analytical application implemented (currently, mach2qtl and mach2dat for linear and logistic regression, are freely available at http://www.sph.umich.edu/csg/abecasis/MACH/download/).edu/csg/abecasis/MACH/download/