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The data access interface serves files output from data processing components using a cloud repository.
Standard Flowgram Format (sff) files output from base calling were employed in subsequent genome assembly.
The spot density files output from GenePix Pro 6.0 were analyzed by eyes to remove bad spots.
The analysis pipeline of our R package starts with the binary alignment/map (BAM) files output from the alignment.
Our final grafted tree was pruned down to correspond to the 180-alignment files output from our saturation analysis (see Additional file 1).
All sequence datasets, alignments, spreadsheets, annotation files, output files and lists of gene ontology terms for analysis are available at the Dryad link associated with this study.
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Whatever you choose to shoot on, make sure you've factored in file output.
The master monitors each map task's successful completion and notifies reduce workers of the map file output locations.
Two additional software tools allow for the generation of EOS tables in different file output formats and for the calculation and visualization of isolines and Hugoniot shock adiabats.
SAM file output from Bowtie2 was subsequently used to visualize the mapping coverage via BRIG [ 30].
The mechanism supports saving and restoring charts, as well as high-quality image file output suitable for publication.
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