Sentence examples for files of models from inspiring English sources

The graphic representations of PDB files of models generated by SWISS MODEL were produced with the molecular visualization software RasTop [ 73].

PathCase-SB Simulation Interface allows users to either directly use SBML files of models in PathCase-SB database (i.e., the SimCom tool) or to upload their own SBML files of models (i.e., the iModel Tool), and simulate them in a comparative manner.

Binary STL files of the models, compatible with most common models of printer, are available online [8].

This created a single cumulative raster file of model agreement for B. anthracis presence ranging from 0 (all models predict absence) to 10 (all models predict presence).

However, Rhinoceros 3D is not open source, and its commercial, educational, or trial license is required for exporting STL files of splint models.

2. The next step consists of searching through the SBML files of the models.

PySCeS MDL files of the models were obtained as described under " Methods".

Additionally, we will provide access to the Rich Molecular Format (RMF, http://integrativemodeling.org/rmf/nightly/doc/format.html) files of the models (which can be open using Chimera) and the corresponding PDB files.

Input files of the model issued from measurements provide the appropriate coefficients of the model attached to the simulated scenario.

The coordinate files of homology modeling are available from the corresponding author upon request.

These provide access to only the SBML files of the literature models, all the model files (all formats in addition to the SBML files) of the literature models, all the RDF/XML files for the curated models, and all models from Path2Models (in three archives for the metabolic, nonmetabolic, and whole genome metabolism models).