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The ectopic division event highlighted in Fig. 2L is associated with a cell expanding at an oblique angle to the cell file orientation in this region, indicative of defects in the control of axial cell elongation.
The 7776 peptide spots represent 7446 unique peptides, 153 negative control spots, 96 controlsrols for GAL file orientation and 24 positive controls spots (4 repetitions each of IgG, IgA, IgM, IgE).
Similar(58)
The resulting BAM files include orientation information as well as the mapping coordinates for each read pair.
The format of orientation file in this protocol is uniform.
"ort.dat" is a generated orientation file containing the same orientations and defocus values as those of "ort0.dat" but with the center parameters updated to 0,0.
"virusImgBin2.stck" and "ort.dat" are stack of virus particle images and its orientation file generated in Step (1), respectively.
The following was the setting for recISAFs: orientation file name was x.dat; number of particles was 891; diameter of particle (odd only) was 261.
The spatial distribution of cones was inferred from the local densities with their coordinates X, Y recorded in an Excel file and the orientation (Ventro-Dorsal, Naso-Temporal).
"ort0.dat" is a text file containing particle orientations, centers, and image defocus values (astigmatism) of these particle images (hereafter orientation file).
For each of these images, an identical linear diffusion scheme with precomputed orientation filed was run to locate the desired peak in their respective entropy-change graphs.
The software outputs a stereonet of discontinuity orientations colored by joint set family, an image of the 3-dimensional model with each mapped discontinuity colored by the set family, and a text file of discontinuity orientations.
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