Sentence examples for file obtained for from inspiring English sources

An ABI file obtained for each sequence were analysed with the CLC Main Workbench Version 6.0 (CLCbio, USA).

SHAPE-based secondary structure of the RRE RNA was calculated using RNAstructure Web Servers (Reuter and Mathews, 2010) with the SHAPE reactivity file obtained for the free RRE RNA (Low and Weeks, 2010).

Since linkage phase was known, the two data files obtained for each female were merged and analysed as a single data set.

Lastly, the trimmed codon alignment and the phylogenetic tree files obtained for a given group are used as input files for the codeml program to detect signs of positive selection using site-model analysis [ 4].

For quality control, we compared expression files obtained for all of the samples by PCA to ensure that samples representing plants of the same lines grown under the experimental conditions were similar.

The raw mass spectrometric data files obtained for each experiment were collated into a single quantitated data set using MaxQuant (Cox and Mann, 2008) and the Andromeda search engine software (Cox et al, 2011).

The raw mass spectrometric data files obtained for each experiment were collated into a single quantified dataset using MaxQuant (version 1.0.13.13; http://www.maxquant.org) and the Mascot search engine (Matrix Science, version 2.2.2) software.

The raw mass spectrometric data files obtained for each experiment were collated into a single quantitated dataset using MaxQuant (1.3.0.5) [ 18] and the Andromeda search engine software (1.3.0.5) [ 19].

The relative changes in transcript abundance were obtained using Cuffdiff with parameters --library-type fr-firststrand --min-reps-for-js-test 1, using the merged GTF file obtained from Cufflinks for GM12878 and K562, along with the bam files of GM12878 and K562 with replicates.

The number of registered vehicles in Minnesota was determined from the MNDOT vehicle registration file obtained in 2004 for models 1995 2002.

We chose cities to represent the range of weather patterns seen in the U.S. Hospital admissions of persons age 65 years and older in the above cities were extracted from Medicare files obtained from the Health Care Financing Administration for the years 1992 2000.