Sentence examples for file is sorted from inspiring English sources

Searching for a particular record in a file is aided by maintaining secondary indexes on arbitrary attributes as well as by maintaining a primary index on the same attribute on which the file is sorted.

File is sorted by descending incidence.

File is sorted by lexicographical order of SMARTS strings.

The file was sorted and duplicates were eliminated according to the Enredo documentation.

The resulting file was sorted again and indexed with SAMtools "index".

This BED file was sorted and intersected with another BED file of newly identified TSS (genomic co-ordinates of TSS and 100 bp downstream) from present study using intersection option available in BEDTools [ 57].

When the file was sorted by position rather than read name, so that mate pairs were not in adjacent records, processing time increased to a bit less then twice as much, and, for a SAM file of 26 GB, less than 450 MB of additional space in RAM were needed for the buffer holding reads with outstanding mates.

We used the GTF gene model file provided by The Sanger Centre for splice junctions and read counts (ftp://ftp.sanger.ac.uk/pub/users/searle/cat). Each file was sorted using novosort (http://www.novocraft.com/wiki/tiki-index.php?page=Novosort&structure=Novocraft+Technologies&page_ref_id=91) prior to read counting.

As the files are sorted by k-mer, this module efficiently accumulates k-mer counts and writes a sorted output file.

You can switch from the vertical "fan" arrangement to a list or grid of icons, and also change the way the files are sorted when displayed.

SGA files are sorted by chromosome, position and strand, allowing for rapid, sequential processing by downstream analysis tools.