Sentence examples for file indexed from inspiring English sources

The assembly data was exported as a BAM file, indexed using SAMtools [ 47] and imported in Gap5 [ 48].

Some nodes have been designed to find the intersection between the variants in the VCF file and a various source of annotated genomic regions, which can be: a local BED file, a remote URL, a mysql table, a file indexed with tabix (Li, 2011), a BigBed or a BigWig file (Kent et al., 2010).

A flat file indexed on TS IDs was used to store TS expression data.

In Daniel's written statement at the end, he's almost channelling Pat McGoohan from The Prisoner: I will not be stamped, filed, indexed, briefed, debriefed or numbered, my life is my own.

Relative files, like indexed files, have a unique record key, but they do not have alternate keys.

We further converted SAM files to BAM files and indexed them to create BAM.BAI files.

A BAM file is indexed using hierarchical binning and linear index to allow very efficient retrieval so that only one disk seek (moving the disk head to the desired location) is often required for each query [ 25, 27].

The resulting BAM files were indexed with SAMtools "index".

The library would store the folders containing the articles in a file room, indexed based on diverse criteria, and containing articles from vast numbers of editions.

This aligned file is indexed with SAMtools to yield the processed aligned file.

This file was indexed with formatdb, so that it could be used as a database for local BLAST searches [ 8].