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The input signals are usually read from a text file; in this study the same descriptors were used as for MLR modelling.
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The log-files in this study were restricted to the main DDs presented above (CP, AP, GE, UTI and PO).
All 3 authors maintain private chiropractic practices from where all of the patient files in this study were taken.
Additional CEL files from [ 33] were combined with CEL files in this study, analysed with dChip and expression values imported into Chipster 2.12 [ 76].
The mappability file used in this study was obtained from http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeMapability/.
The file used in this study was purchased by a co-author of this study (K. Khan).
The geographic boundary file used in this study was downloaded from the United States Census, TIGER, Geodatabase [ 20].
The IGES file used in this study has been provided by Proclinic dental implants, manufactured by Avenir S.L. (Rimini, Italy).
(Additional file 1) In this study a CQ-index AH has been constructed and tested among 2063 patients in 22 GP practices.
The project configuration file used in this study (CellProfiler.cpproj) with all parameters is available to download at https://bitbucket.org/linora/cellcounter/downloads.org/linora/cellcounter/downloads
This R script is provided in Additional file 2. In this study, the null hypothesis is that there is no significant association between the two category variables (pocket mutations versus non-pocket mutations).
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