Exact(2)
This file constitutes the single-end reads used throughout this work.
For example, in the case of RNA-seq, the mapping to a reference genome that produces a bam file constitutes an intermediate step.
Similar(58)
Its focus is whether an e-mail message that Mr. Quattrone sent in December 2000 suggesting that bankers "clean up their files," constitutes obstruction of a federal investigation, according to lawyers briefed on the matter.
The case against Mr. Quattrone, who helped take companies public during the boom, hinges on whether an e-mail message he endorsed, directing department members at Credit Suisse First Boston to clean up their files, constituted an effort to obstruct a government investigation.
The ICASA files constitute an advance in the potential for good documentation and storage of agronomic data, but only partly solve the problem of overall data management and use.
A high-level overview of SYMRT is shown in Fig. 3. SYMRT takes as input the Java class files constituting the real-time system and a configuration which, among others, specifies the analyses and the model generation technique.
The input for DiffBind consisted of two files per sample; the output from MACS containing the called-peaks and the bam files constituted by the aligned reads.
These files constitute together the output that ARES delivers after simulation for the user into the output's archive (the output's archive can be accessed using the " OUTPUTS" tab in the ARES menu).
MAPFS, a parallel file system, constitutes one successful application of agents to the I/O field, providing a multiagent I/O architecture.
Additional File 1 constitutes an appendix on the basics of this regulation mechanism and the definition of the Hill function, which describes transcriptional interactions.
As mesenchymal cell proliferation is involved in angiogenesis [ 67], this set of 15 genes (Table S9 in Additional file 1) constitutes an angiogenic sub-network, or program, whose transcriptional regulation is dramatically altered in ovarian cancer.
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