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The results of these experiments confirmed that the field of alignment could be reduced considerably by increasing M or Δχ, and also by decreasing T, as expected from Eq. (1) (Uyeda et al., 2005a).
A field intensity where the anisotropy energy (1/2)MΔχB2 of the particle was equal to (15/2 kBT was defined as field of alignment Bs (Uyeda et al., 1993), which was directly calculated from the Langevin process as (1) The value of 〈m〉 is equal to 0.78 when the external field is equal to Bs.
Several recent reviews have offered a detailed perspective on the field of alignment.
Hash table indexing, which was first introduced into the field of alignment by BLAST [ 23], keeps the positions of k-mer query subsequence as keys, and then searches for the exact match of the keys in reference sequences.
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At low applied voltages (from 0.3 to 2 V), the effect of the electric field on alignment and growth rate enhancement revealed the generation of vertically aligned carbon nanotube (VACNT) arrays with uniform distribution of CNT diameters.
Yet, all things considered, meta-methods only offer a marginal improvement over single methods, and they even suggest that the current state of the art aligners are reaching a limit that may hard to break without some novel development in the field of sequence alignment.
We present a technique to produce spatially distributed fields of geometric alignment between topography and the orientation of geologic bedding planes (topographic/bedding-plane intersection angle).
Besides parallelization, there is still much space for improvement in the field of multiple sequence alignment in performance.
While the use of consistency is widely recognized as an important development in the field of multiple sequence alignment, this improvement comes at a cost.
One way of incorporating such relationships is to introduce a weighting scheme, which has been investigated in the field of multiple sequence alignment (e.g., [ 70]).
For this, CapFilter enumerates the percent of reads within a peak that had a 5′ unencoded "G" removed (based on the nucleotide identified in the "qname" field of the SAM alignment).
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