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Time-course expression profiles of one xylanase and eight cellulase encoding genes, as well as of two transcription factor encoding genes of Humicola grisea var.
We identified the kanamycin resistance gene and the transcription factor encoding rhaR gene to be causal for the growth defect in P. putida.
Here we identify Hes1 as a transcription factor encoding gene expressed in the SHF and show that Hes1 is required for normal OFT development.
Further, we identified transcription factor encoding transcripts by sequence comparison to known transcription factor gene families.
Mesangial cells showed very robust expression of three growth factor encoding genes, Ptn, Mfge8 and Gdf10.
The virulence factor encoding genes were detected in 79.8% (79/99) of the isolates.
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EvoPrinter analysis of the MRSA252 chromosome also uncovered virulence-factor encoding HGT events with the genome of Listeria monocytogenes and a Staphylococcus saprophyticus associated plasmid.
While our method consistently favors DPPS encoding with the alleles tested, SVM shows a slightly better accuracy with 11-factor encoding.
The 11-factor encoding is calculated from physicochemical properties of amino acids as described by [ 12].
However, with 11-factor encoding, the AUC obtained by SVM was higher than any AUC obtained by ℓ1-minimization.
While our method consistently favoured DPPS encoding with the alleles tested, SVM showed a slightly better accuracy when "11-factor" encoding was used.
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