We collected multiple ants (6 10) at each timepoint and reported sample sizes are the RNA samples successfully extracted from these collections (either 3 or 4 individuals per colony and 3 5 colonies per time point, depending on season).
That, roughly, is the parenting tip I extracted from this collection of essays about writers and their mothers.
Collection metadata comprises metadata entered by the user, described in more detail in the subsection Collection Metadata, and metadata automatically extracted from the collection such as the file sizes.
For each specimen, a percentage of DNA extracted from the collection device (i.e., adhered cell) was computed.
28 bacterial genomes from a range of species covering common human commensals were extracted from the collection of available reference genomes from NCBI (cf. Additional file 1: Table S1).
Information was extracted from these documents using a data collection matrix designed to identify the dominant frames used to conceptualize global health, existing forms of collaboration with other sectors, and to corroborate the themes that emerged from the interviews (see Additional file 2 for the matrix).
ACToR contains knowledge extracted from large collections of data and data sets that are transformed into computable formats [58].
The VSM contributes for literature-based discovery by helping to predict the best new potential interactions not easily extracted from textual collections.
In this sense, ranking strategies for new interactions predicted from few indications are an important tool for literature-based discovery because they help in the identification of relevant interactions not easily observed and extracted from textual collections.
In this work we have introduced a technique that employs the Vector Space Model (VSM) for the identification of biological entity activities based on a network of biological entity interactions extracted from textual collections.
We first looked for miRNAs having perfect seed complementary sites (nucleotides 1 8 and 2 9) to sequences within three sequence collections, extracted from the RefSeq collection of mature human mRNAs: i) sense Alu-elements, ii) antisense Alu-elements and iii) Alu-depleted mRNA sequence (Figure 1A F; see also Materials and methods).
