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In the second step, candidate proteins are extracted based on their functional similarity to the seed set and a domain-specific similarity network is generated by extending this set by all functionally related proteins.
Lipid peaks including spiked IS such as LPC (17∶0), LPC (19∶0), PE (34∶0), PE (30∶0), PC (34∶0), PC (38∶0), TG (51∶0) and TG (45∶0) were extracted based on their expected retention time and accurate masses according to an in-house lipid database using LCquan v2.5 (Thermo Fisher).
Subsequently, the reads from each sample were extracted based on their unique nucleotide multiplex identifiers as 83 bp reads (90 – 6 – 1, where 1 is the ligation base "T").
This script makes use of the XML LibXML Perl module for XML parsing, and from each Pubmed record the title of the article, the journal information, the abstract, and the Pubmed ID of the record, are extracted, based on their corresponding XML tag names.
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Genomic DNA from each strain was extracted based on a previous described method.
The transverse shear stresses are extracted based on the three-dimensional theory of elasticity.
First, the land use change trajectories were extracted based on the classified images from different years.
The switching law is extracted based on the variable structure control with a sliding sector.
Some typical movement characteristics and parameters were extracted based on the recording data.
In the present, features are extracted based on the predicted secondary structures.
Finally, the feature points are extracted based on the normal vector variation and fitted to convey the 3D information.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com