Sentence examples for extract coverage from inspiring English sources

Different methods were used to extract coverage vectors for the TSS ± 5 Kb regions of all protein coding genes (~20,000).

To illustrate the depth of coverage within and adjacent to baits arrayed across the gene regions, we extracted coverage data for the gene model POPTR_0006s12590 as an example.

Expression of gene transcripts was retrieved from this genomic map by extracting coverage information of all exons for each annotated gene (BDGP/dm3).

To analyze the coverage, scripts were written to extract global coverage data from the 454AlignmentInfo.tsv file (unique depth, column 5) and the quality of coverage at each targeted nucleotide (column 4).

From this, we are able to extract surface coverage values, layer structural parameters, water content and viscoelastic properties to examine the properties of protein layers formed at the liquid/solid interface.

Subsequently, we extracted read coverage at each genomic position and calculated, using R [ 39], the mean coverage of our reads on the genomes of wBm or B. malayi (Table  1, Table  2).

To investigate the comprehensiveness of extracted biclusters, coverage was calculated in the gene dimension and the condition dimension for all cells in the dataset.

The COV module extracts the coverage for each cytosine from post-alignment data (i.e., CGmap) and generates reverse cumulative plot for methylation sites by the genomic contexts (CG, CHG and CHH, H refers to A, C, or T).

We extracted genome coverage information from the pileup data derived by SAMtools from mapped reads after randomly down sampling to a uniform depth of 15x (this down sampling was achieved by taking "from the top" the number of reads required to give 15x coverage of each genome).

To extract the percent coverage by croplands, forests, grassland, and built-up lands for each county, data on Changchun land cover (1990 , 1995 2000, 2005, and 2010) were collected from Chinese data-sharing network of earth-system science (http://www.geodata.cn/) and the Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences [ 17, 18].

If Rogers can gain even a small slice of wireless market share thanks to hockey, the purchase will pay off in spades.Even if Rogers is unable to extract such leverage from coverage of the NHL, fans still have reason to be concerned about the editorial independence of hockey coverage on Sportsnet.