Sentence examples for extents of sequence diversity from inspiring English sources

Among the three major categories of phylogenetic inference methods, distance, maximum parsimony (MP), and maximum likelihood (ML), ML methods are especially useful for sequence sets with varying extents of sequence diversity [2], [3].

Therefore, the extent of sequence diversity at the full-length of the pfceltos was assessed among both natural P. falciparum isolates collected from Iran (n = 93) and from available global pfceltos sequence data retrieved from PlasmoDB database (n = 159).

To elucidate the gene structure and the extent of sequence diversity, we determined the complete nucleotide sequence of the Na-asp-2 gene of individual larvae from 32 infected subjects living in 3 different endemic areas of Thailand.

The extent of sequence diversity within each infection sample compared to the local population diversity was assessed using the FWS fixation index, which has a potential range from zero (where an infection contains as much diversity as the total seen across the local population) to 1.0 (an infection containing no detectable sequence heterogeneity).

To explore the extent of sequence diversity in domain I of PfAMA1, P. falciparum-infected blood samples from Saudi Arabia collected between 2007 and 2009 were analyzed and compared with those from worldwide parasite populations.

CR1 elements are divided into subfamilies based on the extent of sequence diversity.

The number is likely to vary depending on the extent of sequence diversity within the group and the extent of interspecies recombination.

To investigate the extent of sequence diversity in Balamuthia mandrillaris, we sequenced the mitochondrial genomes from six additional Balamuthia strains obtained from the California Department of Public Health and the American Tissue Culture Collection (Table  1).

Species-specific information content tends to be much higher than the COG-specific information content, providing a rough measure of the extent of sequence diversity between orthologous rice, sorghum and Arabidopsis promoters.

The extent of sequence diversity among the 213 class I and the 75 class II pilE sequences identified in this work was examined, including pilE sequences from eight available reference genome sequences, providing an additional six class I pilE genes and two class II pilE sequences (Additional file 4).

The precise identification of individual endogenous retroviruses can be problematic due to the extent of sequence diversity observed in mutable proviruses, the level of sequence integrity once a retrovirus becomes endogenised and subject to host recombination, and the level of sequence similarity observed in closely related retroviruses (e.g. EAV-HP and ART-CH [ 3]).