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Here, we aimed at quantifying to which extent sequence properties contribute to the DNA replication time in budding yeast.
It remains unclear to what extent sequence variants modulate functionally critical post-translational modifications, such as phosphorylation, glycosylation and sulfation.
Finally, we asked to what extent sequence features in viruses correlated with corresponding features in their hosts.
To what extent sequence variations in microRNA genes are associated with tumorigenesis became a matter of intensive investigation.
One of the initial concerns is to what extent sequence identity in homeologous regions would have on whole genome shotgun sequence assembly.
However, for species with existing transcriptome libraries and gene expression arrays, genomic DNA can be hybridized using transcriptome arrays to detect CNVs (by hybridization signal well above the average) and, to some extent, sequence divergence in coding parts of the genome (by an hybridization signal below the average).
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To some extent, sequences from the same taxonomic class cluster together, but there is a little intra-specific structure in the phylogeny, which means that hardly any taxonomic class-specific signatures could be attributed to the FAEs sequences.
Assortativity analyses were used to quantify to what extent sequences from any location and depth have close homologs in more than one environmental sample of the data set.
To some extent, sequences from the same population cluster together, but there is little intraspecific structure in the phylogeny of the complete alignment.
To a lesser extent, sequences were present in carpels and young buds and stamens and young buds, followed by stamens and carpels alone.
Furthermore, a comparison in sequence coverage between two distantly related species (one bird and one mammal) allows us to evaluate to what extent sequencing bias is conserved across evolutionary distant lineages.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com