Sentence examples for extent of sequence variations from inspiring English sources

To further investigate the extent of sequence variations in the MCP gene, we calculated the non-synonymous and synonymous substitution rates of 23 isolates and compared them to representative strains of GIV, ISKNV, and turbot reddish body iridovirus (TRBIV).

We have evaluated a long-range PCR and high-throughput shotgun sequencing approach to better characterize the extent of sequence variation throughout the entire genomic HLA-DQA1 gene using next generation sequencing (NGS).

The extent of sequence variation among the isolates suggests that newer strains of WSSV are evolving that may have variations in their virulence potential.

The final sequences were aligned by Muscle [48] and alignments were used in the evaluation of the extent of sequence variation, phylogenetic and recombination analyses.

In contrast, the extent of sequence variation within Q2 was extremely low resulting in a coalescence time of only 0.9±1.1 ky.

These questions must be addressed by studying the activity of genes rather than (the extent of) sequence variation.

We discovered an association between the extent of sequence variation and position in the pathway for up-stream genes.

The extent of sequence variation at functional regions of small RNAs and their potential contribution to phenotypic evolution during crop domestication are unclear.

To characterize nucleotide substitutions and the extent of sequence variation, the d N/d S ratio was calculated using START v2 (Jolley et al. 2001).

However, the extent of sequence variation along the 165-bp fragments of the RdRP gene of genogroup I picobirnaviruses for which an entire RdRP gene sequence is available (strains 1-CHN-97, HY005102, and VS10, and GenBank accession nos. AB186898, AF246939, and GU968924) show good correlation with overall sequence variation observed in the entire RdRP gene (13 ).

Point mutations and indels (insertions and deletions) of SR3 were calculated, and their difference from the genetic variation of bread wheat and its ancestors were compared, with aim to analyze the extent and pattern of sequence variation induced by somatic hybridization.