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Even so, they would do well in the meantime to opt for some simple remedies, such as extending penalties for failed trades and broadening reporting of them.
Sequence similarity matrices were calculated with MatGAT [ 112] using the BLOSUM62 substitution matrix and setting the gap opening and extending penalties to 12 and 2, respectively.
Sequence similarity matrices were calculated with MatGAT (Campanella et al. 2003) using the BLOSUM62 substitution matrix and setting the gap opening and extending penalties to 12 and 2, respectively.
All multiple sequence alignments made in the study were performed using MUSCLE software with default parameters (gap opening and extending penalties as −2.9 and 0) as implemented in MEGA version 6.0 [ 112].
Similar(56)
To estimate the similarity of two profiles, multiple sequence alignments of all instances were generated using ClustalW 1.74 (gap opening penalty 1000 and gap extending penalty 0.001).
New Jersey's 1981 law allowing judges to extend penalties for crimes committed because of a defendant's prejudices is unconstitutional, the United States Supreme Court ruled last week.
The heavy artillery of RICO magnifies the state's policing authority, extends penalties, adds civil liability and enables prosecution of individuals only tangentially involved in the patient's care.
To perform multiple-sequence alignment, gap open and extend penalties were set to 10 and 0.2, respectively.
To account for the high-coding density in bacterial genomes, we performed ungapped searches (gap open and extend penalties 1000).
We used BLAST (Altschul et al., 1990) to identify the location of reads that could be aligned unambiguously to one location on the genome, with default BLAST parameters, except for gap open and extend penalties, which were set to 1.
Current sequence alignment methods typically score pairwise alignments with an affine gap scoring scheme consisting of a gap open penalty and a gap extend penalty.
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