Sentence examples for extending gap from inspiring English sources

Exact(5)

Feeling they could take the joke further, they came up with the first annual Dime Glory Challenge last year, a one-day skate contest centered on the Joe Valdez Challenge, an event where skaters do tricks across an extending gap onto a narrow, 12-inch wide ledge.

When a number flows through the "-" unit, an extending gap is applied.

Affine gap cost (or penalty) is a technique where the opening gap has different cost from an extending gap [ 38].

ABC protein sequence similarities and identities were calculated using MatGAT 2.03 [ 127] using default settings (BLOSUM50 matrix, gap opening and extending gap penalty set to 12 and 2, respectively).

The gap cost is calculated as p = o + g(l - 1), where o is the opening gap cost, g is the extending gap cost, and l is the length of the gap block.

Similar(55)

However, the Gotoh optimization for DP alignment with affine gap penalties requires the cost for extending gaps to be monotonically decreasing (Gotoh, 1982).

By default, BWA uses a high penalty for opening gaps (11) and a significantly lower penalty for extending gaps (4), though still higher than the penalty used for a mismatch (3).

Among the multiple alignment algorithms, Clustal was selected as a method for which the expected scarcity and length of potential eRNA-specific motifs could be controlled by setting score penalties for opening and extending gaps in the alignment.

Heuristic "costs" for opening and extending gaps are replaced by the insertion/deletion rate and the mean indel length respectively, which are biologically interpretable parameters and can be estimated from the data without circularity [ 22, 23].

The recursive definitions of I i, j, k) and D i, j, k) are as follows: (2) (3) where Δ g_open and Δ g_ext are penalties for opening and extending gaps, respectively (affine gap penalty is used in our network matching algorithm).

Two main definitions of treefall gaps exist: canopy gap: a 'hole' in the forest through all levels down to an average height of 2 m above ground and extended gap: canopy gap plus the area that extends to the bases of surrounding canopy trees.

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