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The difference in gene expression is designated as log2 and fold value (see Additional file 3: Table S3 for these two values).
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HER2 expressing tumors without HR expression were designated as HR-/HER2+ (13 cases, 11.2%).
DDX21 expression was designated as 0 = no staining; 1 = weak; 2 = moderate; and 3 = strong.
The two subpopulations with low and high GFP expression are designated as L and H subpopulations respectively.
Typically, the 3-5% of cells with the highest CD44 expression was designated as CD44high cell subset and the remainder of the population was designated as CD44low cell subset.
Cells with reduced expression were designated as follows: A2780cisSN - snail knockdown, A2780cisSL - slug knockdown, A2780cisSN/SL - both snail and slug knocked down.
With a focus on different combinations of these markers, we distinguished four distinct, non-overlapping classes: tumors positive for ER and/or PgR expression and negative for HER2 expression were designated as HR+/HER2- (57 cases, 49.1%).
Precursor of miR-128-2 miR-128-2 miR-128-2ncer 4.1 vector (Ambion, Austin, TX, USA) as described and this miR-128-2 expression vector is designated as p(128) throughout the manuscript.
Bile duct tissue displayed the lowest expression of ANXA1 and is designated as the calibrator.
This medium is designated as HCM.
It is designated as MYHTail1_As.
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