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Whilst SLIT3 demonstrated copy number and expression concordance in 83% (15/18) SCCs but only 53% (10/19) ACs.
The highest expression concordance was observed between Methods 1 (no depletion_Affymetrix) and 2 (Globin PNAs_Affymetrix).
However, our small numbers of individual c-MET expression concordance provided only limited insight.
There is a high gene expression concordance rate (over 80%) between PBLs and other tissues, both in humans and other species [ 21].
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In addition, changes were noticed in DMRT1 expression in concordance with the phases of testicular differentiation in several fishes that change their sexes naturally (Alam et al. 2008; He et al. 2003; Liarte et al. 2007).
For MAM expression, a concordance of 75% (111 of 148) was found between blood and BM (Table 2).
Finally, for further evaluation of the predictive value of BTG2 expression, the concordance probability of the Cox regression models including or excluding BTG2 was calculated.
For hMAM expression, a concordance with ICC of 70% is found (Mc Nemar: P=0.22), with a fair κ value as well (0.42).
However, we did not find a prognostic impact for E-cadherin expression, in concordance with findings in colorectal cancer (Van der Wurff et al, 1992 , 1997.
Using 20%% as the cutoff value for a high level of Ki67 expression, the concordance rate was 80.4 %, with κ value of 0.60.
Fold change between the first and the last time point and Kendall's correlation coefficient were chosen as measures of differential expression and concordance.
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