Genome-wide gene expression analysis identified 14 probes that were associated with triptolide IC50 (p < 0.0001, Additional file 3: Figure S2 and Table 4).
Gene annotation and quantitative RT-PCR expression analysis identified 464 transcripts that may be involved in phytohormone catabolism and biosynthesis, hormone signal, seed dormancy, seed maturation, cell wall growth and circadian rhythms.
Single cell gene expression analysis identified individual MaSCs that either co-expressed Vim and Krt15, expressed Vim or Krt15 alone or were negative for both.
Furthermore, batch-corrected expression analysis identified three additional lectins that were over-expressed in vCD14+ DCs and vMøs: CLEC2B, CLEC5A and LGALS8 (Additional files 15 and 16).
Digital gene expression analysis identified numerous candidate genes that may play a role in stem development as well as candidate genes that may contribute to the differences in cell wall composition in stems of the two genotypes.
Expression analysis identified only four genes that are significantly up-regulated in both lys-7 knockout strains (ok1384 and ok1385) in comparison to wild type animals: abl-1 (2.65±0.94 fold up-regulation), fat-5 (1.82±0.15 fold up-regulation), clec-60 (1.59±0.08 fold up-regulation), and rga-6 (1.92±0.089 fold up-regulation).
Finally, a gene expression analysis identified stress-induced targets that are selectively regulated during re-infection and can potentially help the process of adaptation.
Subsequent expression analysis identified a number of genes that appear to be expressed exclusively or at very high levels in phloem tissue, including genes that are known to express specifically in the phloem as well as novel phloem genes.
The expression analysis identified a common set of genes that were regulated by tipifarnib in three leukemic cell lines and in leukemic blast cells isolated from two patients who had been treated with tipifarnib.
Fehrmann, R.S. et al. Gene expression analysis identifies global gene dosage sensitivity in cancer.
