In the PvH contrast, 341 genes were differentially expressed of which 77 were common with the PvS contrast.
Following inoculation with pine wood nematode, there were marked differences between resistant and susceptible trees in transcript diversity and the timing and level of transcripts expressed in common; in particular, expression of stress response and defense genes differed.
The set of differentially expressed genes common to both of these two methods make up the set of genes used for further analysis.
This allowed detection of bona fide transcriptionally regulated genes, thus reducing the interference of steady-state mRNA turnover on the pool of expressed mRNA common to conventional microarray analysis.
"#ThisIsACoup may have started in Barcelona, but it resonated around the world because it expressed a common sense of impotence of citizens in the face of globalised financial powers," they wrote.
We also showed by clustering analysis of the transcripts expressed in common that the pattern of expression depended on the age of the animal rather than on individual characteristics.
Table 5 identifies that subset of expressed genes common in fracture repair, ESCs, embryonic MSCs and post embryonic MSCs, and fracture healing.
If this is true, we should expect, for instance, the proportion of genes expressed in common in the reproductive organs of a gymnosperm and the flower of an angiosperm to be greater than the proportion of genes expressed in common in the reproductive organs of a gymnosperm and the vegetative organs of an angiosperm.
The GO enrichment analysis was performed using log2-based ratios of the differentially expressed common genes of all rice NILs through the parametric analysis of the gene set enrichment (PAGE) method and the singular enrichment analysis (SEA) method using agriGO, a GO analysis tool for the agricultural community [ 30].
The Venn diagrams on Fig. 4 present the number of differentially expressed proteins, common or unique between models of obesity.
