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The resulting FDMn is the sequence for the gene model n as it is expressed in the set of RNA-seq data with error flags inserted into the sequence where the observed expression was found to deviate from the published gene model.
These enzymes are involved in plant metabolite degradation (Gaffney et al. 1993; García-Conesa et al. 2001) and, thus, may not be expressed in the set of conditions that we investigated.
The conceptual framework of needs developed by data-led analysis enabled the diversity of needs expressed in the set of reviewed papers to emerge, and also facilitated the synthesis of studies that drew on a range of theories and approaches that were not all directly comparable.
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A joint celebration of both British and working-class identity was tangibly expressed in the setting up of the welfare state: there appeared to be a lasting settlement between capital and labour.
It has been identified that biologically active molecules such as the cytokines are expressed in the setting of heart failure [ 10– 13].
Alternatively, HPV status can be assessed indirectly through the p16 biomarker, which is generally highly expressed in the setting of HPV infection.
Almost all subunits of the ETC protein complexes were expressed in the HK set).
Fourteen differentially expressed miRNAs were significantly differentially expressed in the replication set and thirteen of these fourteen were significant in the combined sequence analysis.
To inspect translation on a genome-wide scale, ribosome density values of each gene expressed in the data set were organized in the same order as the transcriptome.
Generalized linear modeling was used to identify genes that were differentially expressed in the data set; contrasts were used to compare the differences between treatment groups.
We randomly chose M combinations of N (for example M = 100,000 when N = 15 for fifteen-marker panel) out of all the 42 genes differentially expressed in the training set and built M SVMs.
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