From genes that are differentially expressed in the transcriptome database, we analyzed the relative expression of some selected genes in resistant and tolerant soybean plants subjected to water deficit.
This implicit ontology reflects the concepts expressed in the relational database, and is not formally defined.
Zebrafish CYP11A2 is 80% identical to CYP11A1 at the amino acid level, but little is known about functional similarities between the two forms, or about CYP11A2 expression, although based on our microarray results (see below) it appears to be expressed in the early embryo, and database EST evidence indicates that it is also expressed in adult gonads.
Interestingly, we also found several tissue-specific miRNAs including bbe-miR-4869-5p, bbe-miR-4867-3p and bbe-miR-2071-5p in the context of the six tissues we investigated, are solely expressed in the amphioxus based on miRBase database.
The 7 proteins that were not expressed in the prostate according to these databases included cystatin-S, cystatin-SA and lipocalin-1.
a lightweight deductive database system where queries and database updates are expressed in the logic language.
Additional genes that mapped in the region and were expressed in the liver according to the SymATLAS database [17] were tested; Ncor2, Dhx37, Bri3bp, and Aacs; but none showed significant differential expression between B6 and the mutant (Figure 2).
TC85320 and TC90812 are differentially expressed in the two cultivars and the TIGR database profile [ 20], but show little change in expression during cool temperature, in-vitro culture.
In those studies, consortium investigators used RNA-Seq to analyze the transcriptomes of 15 cell lines, and determined that 85% of the annotated exons in the Gencode V7 transcript database were expressed in the aggregate data.
The previously described Psg-ps1 pseudogene [ 8] was found to be expressed in the placenta using Trace Archive EST database BLAST analysis and possesses an excellent Kozak sequence at the predicted translational initiation site.
