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Expression of 52 genes is significantly different due to the effect of treatment alone, while 26 genes are differentially expressed due to differences between reference and resistant embryo populations.
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The high proportion of non-coding regions could be interpreted as an accelerated inactivation of useless genes, for instance because they originated from other domains of life and could not be expressed due to the differences in gene expression machinery.
So the disaccharide metabolism genes indeed might be differentially expressed due to the difference in the nectar production.
This process would differentiate the DEG transcripts involved in low-N tolerance from the genes differentially expressed due to unrelated genotype differences.
However, caution is expressed due to the skewed histograms of difference scores.
This suggests commonalities (as well as differences) between genes differentially expressed due to eIF4E overexpression or AKT activation.
Genes differentially expressed due to early Strep.
The env gene is not expressed due to a 5' frameshift.
A gene may be falsely identified as differentially expressed gene due to differences in mappability between species.
Iron sulfur cluster containing proteins of bacterial origin are known to be challenging to express in eukaryotes due to differences in the complicated cell machinery responsible for the loading of the Fe S cluster onto the apoprotein (Benisch and Boles 2014).
A hybrid construct is used to identify genes that are expressed at different levels due to differences in transcriptional efficiency caused by cis regulatory differences.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com