Since the method can be applied to control distance of both NPs and biomolecules, it would be interesting to explore assemblies of both proteins and NPs in the same system and their functional properties, such as self-propagating, multistep catalysis and reactions.
For the production assembly, we explored assembly parameters using different mixes of our data, evaluating each for total span, maximal contig lengths, N50, number of contigs, representation of the transcriptome, and conserved eukaryotic gene content (using the CEGMA pipeline v.2.1 [ 36]).
To explore the assembly and disassembly before and after illumination, we used a DynaPro NanoStar® instrument (Wyatt Technology, Santa Barbara, CA, USA) to analyze the changes in the particle size of the BNAS SspB (BNASS) supramolecular complex.
Exploiting the similarity of constraint satisfaction and DNA self-assembly, we explore a DNA assembly model of sentence generation.
8 We have explored the assembly potential and structure of a segment of α‐syn corresponding to positions 37 44 (NH2‐VLYVGSKT‐COOH) herein referred to αSβ1.
Currently we have not explored transcriptome assembly from an organism in which alternative splicing is prevalent, neither have we had a good reference set that contains a comprehensive list of alternatively spliced transcript variants for evaluation of such effects.
There have been numerous studies exploring Rubisco assembly, which show that rbcL and RbcS subunits accumulate in equal amounts within the chloroplast stroma, and the loss of either peptide will cause a decrease in the other subunit peptide [ 25].
After combining the reads produced for each sample, we explored three assembly strategies to obtain the best reconstruction of transcripts, TrinityNorm and DigiNorm, which include its own normalization algorithms for redundant reads removal, and Multireads, which simply consist on the assembly of the joined reads.
The de novo assembly information is summarized in Additional file 2. Instead of subjectively selecting a single kmer size for transcriptome assembly, we explored multiple-kmer assemblies followed by merging raw assemblies and removing redundancies, as recommended by previous studies [ 15- 17].
