We exploited the dataset from a published artificial spike experiment [ 11, 14]; the complete dataset was obtained as a personal communication by Semyon Kruglyak [See additional file 1].
As demonstrated by our results, generalization to independent datasets in the presence of high levels of confounding factors (such as clinical site, exact composition of trial population, etc). is very difficult and research should be invested to not only find better mathematical approaches to exploit the dataset at hand, but incorporate other prior knowledge in an optimal way.
A specific feature of the present essay, which may make this overview if not comprehensive at least of particular interest, is that the reader is guided through the various traditional and more up-to-date methods by the central thread of techniques developed to measure soil moisture interwoven with applications of modeling tools that exploit the observed datasets.
We exploited the above datasets to compare our method, the Underlying Approach (UA), with other efficient state-of-the-art approaches in the whole-genome phylogeny reconstruction challenge: ACS [ 7], FFP [ 4]d and FFP RY.
First, we have created one table for each of the previous datasets, exploiting the following keys to link tables: UPC attribute is the unique identifier of projects (Unified Project Code) and FC is the unique identifier of partners (Fiscal Code).
Some recent works consider exploiting the hierarchical structure of dataset for image recognition and achieve impressive improvements in accuracy and efficiency [14].
We therefore exploited the present dataset on tissue types to compare the pairwise correlation of expression of genes from homolog clusters.
With respect to the pairwise approach, the multi-view approach solved the alignment failures of the Cherub and the Hurricane datasets by exploiting the cumulative information available.
In conclusion, GESearch provides an interactive platform for exploiting the large-scale gene expression datasets.
The development of a method that is capable of maximally exploiting the information contained in incomplete datasets for solving Problem 1 is the main subject of the article and will be fully developed in the later sections.
