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But it found that the materials needed to perform basic experiments were available to enthusiasts outside academia and established labs.
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Unfortunately, only a few relevant experiments are available to validate this modeling approach.
When existing data is used for omics-based molecular signature discovery, it is particularly important that sufficient information about the experiment is available to ensure that good experimental design was followed (this will be discussed further in Section 4).
Raw and processed data for DriverMap sequencing experiments are available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi acc=GSE114037.nih.gov/geo/query/acc.cgi acc=GSE114037
Raw and processed data from RNA-Seq experiments are available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi acc=GSE113964.nih.gov/geo/query/acc.cgi acc=GSE113964
Plasmids, plasmid sequences and the host strain constructed for cell-growth-control experiments are available at Addgene (#80380, #80381, #80403).
The experimental package for all experiments are available at http://wiki.dcc.ufba.br/LES/JoseAmancio.
Detailed methods for microarray experiments are available at http://cmgm.stanford.edu/pbrown/protocols/index.html.html
Detailed methods for microarray experiments are available at the Brown lab website (http://cmgm.stanford.edu/pbrown/protocols/index.html).html
Array experiments are available at ArrayExpress with the accession numbers E-MEXP-2304 E-MEXP-2304 E-MEXP-2304
Results of both experiments are available at GEO [ 26]; accession no.
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