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Validation data is obtained from generic experiments that contain the important features of wave-structure interaction.
In summary, we have developed and implemented a procedure for predicting quantitative genetic (or epistatic) interactions using independent experiments that contain overlapping query genes.
For particular experiments that contain only two groups of samples, such as normal state versus disease state and tumour adjacent tissue versus primary tumour tissue, we conducted differentially expressed gene analysis.
The query is evaluated by the ArrayExpress search system, and returns all experiments that contain the query keywords or synonyms of query keywords, in any field; about 50 experiments matched the query on 15 June 2010.
One approach to resolve the valence versus salience confound is to design experiments that contain both appetitive and aversive outcomes, although for ethical reasons, this is often difficult to do in animal studies and therefore much less is known about how aversive outcomes are represented in the brain compared to appetitive outcomes.
Because a slight increase in the pre-mRNA fraction may result in dramatic increase in intronic reads (Additional File 4), for RNA-seq experiments that contain a substantial fraction of intronic reads, normalization by total mapped reads may severely bias gene expression estimates.
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Using previous chalcophile element partitioning experiments that contained more complex Fe-Ni-S sulfide melts, we also derived an empirical correction that allows SCSS calculation for basalts where the equilibrium sulfides contain variable Ni contents of 10 50 wt.%.
None of the experiments that contained Sr2+ in the titrant were included in the calculations of Sr distribution coefficients.
We then averaged the yields from different experiments that contained the same number of total strains.
We used the probe level measurements from standard genotyping experiments that contained 144 case-control blood DNA samples as a reference set to normalize the data.
A total of 178 791 modules were detected from 440 expression experiments that contained 2195 conditions.
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