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Prokaryotic taxa used in our experiments, divided by domain.
Rosetting in TM284R + parasites was tested in a total of 91 RBC samples in three separate experiments divided by blood group, O (n = 31), A (n = 29) and B and AB (n = 31).
Co-occurrence of genomic chromatin state annotation between experiments was calculated as the number of bins that were annotated as a particular chromatin state combination in two experiments divided by the total number of bins annotated to those states in the respective experiments.
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Quantification was determined by counting the number of immunoreactive (ir) cells in each experiment divided by the total number of cells (DAPI-ir cells) in the same experiment.
The relative nucleosome density of a fragment was calculated as the average nucleosome density of its all base pairs in the nucleosome reconstitution experiment divided by that of the control experiment using naked DNA.
We calculated this value as either the mean MR in the first 20 minutes or in the last 20 minutes of the recovery phase of the experiment divided by the initial 22°C RMR for each pool of larvae.
Pressing the correct button to 'pick up' the coin led to actually receiving this money at the end of the experiment (divided by a constant factor of ten); subjects were informed of this.
For our experiments, we define the value for a given node x as its normalized intensity ratio, which is its intensity ratio divided by the maximum intensity ratio observed in the experiment (if v is a green node) or the minimum intensity ratio observed in the experiment divided by the intensity ratio of the node (if v is a red node).
We divided both genome into 50 bp consecutive fragments, and calculated the relative nucleosome density of a fragment as the average nucleosome density of its 50 bp in the nucleosome reconstitution experiment divided by that of the control experiment using naked DNA.
A chi-square least-squares measure was used to determine the goodness of fit between the experimental data (xexp) and the theoretical predictions (xpred), which is the sum of the square distances between prediction and experiment, divided by the square of the estimated error (∊ exp 2 ) on each experimental measurement.
We estimated the amount of grazed tissue of each thalli from the loss in wet weight of the grazed part plus the gain of tissue in the control (due to growth during the experiment) divided by the dry weight of all four grazers in one container.
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