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Interestingly, roughly one third of the genes that were downregulated more than 2-fold in one or both CATMA microarray experiments cluster in a genomic region of approximately 84 kb upstream of RLK902.
The dendrogram can serve to check if the experiments cluster in accordance with the sample classes.
The fast-growth rate experiments cluster together (FPMT, FPM03 and N03) and are highly correlated to each other.
We identified rapid phosphorylation of SIN1 on T86 in response to insulin in our MS-based proteomics experiments (cluster A; Figure 5) along with Akt (T308) and numerous Akt substrates (area under curve [AUC] = 0.86; Figure S4B).
In general, each takes a set of genes as input and aggregates raw microarray experimental results into informative plots and tables, for example showing host experiments cluster by plant tissue.
The PBS degradation is triggered by a small polypeptide encoded by nblA (non- bleaching) genes (ssl0452 and ssl0453 in Synechocystis), which were significantly up-regulated in our microarray experiments (cluster 4 in Figure 2) and confirmed by quantitative reverse-transcription PCR (see above).
Similar(54)
Indeed, in their lineage-discrimination laboratory experiments, clusters of trophozoites from each Entamoeba aggregated at a distinctive rate, density of cells per cluster, and distance among clusters.
First, experiments clustered together should be similar, and those clustered separately should be dissimilar.
The 40 cell-types (54 experiments) clustered using unsupervised hierarchical clustering based on average linkage and Pearson correlation distance metric.
Results obtained from both microarray experiments clustered together, but were different from those of the mycotoxin patulin.
In initial experiments, clusters of cells known as islets from the human pancreas were either exposed to small proteins that cause inflammation or infected with the Coxsakievirus.
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