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Exact(21)
These may belong to the recently identified new class of mRNA transcripts that initiate near the expected transcription start sites, upstream of protein encoding sequences [55] [59].
Indeed, several recent studies have reported the discovery of a new class of short promoter-associated RNA transcripts that initiate near the expected transcription start sites upstream of protein-encoding sequences [56] [58] (reviewed in [55]).
Our solution requires the audio recording, expected transcription of the recording, and a G2P tool.
This matches the expected transcription orientation given the sequenced catalog of crRNAs from E. coli [30].
As expected, transcription of α toxin was decreased in the Δstp1 mutant and increased in the Δstk1 mutant.
In all four samples, the expected promoter decay factors Kp were larger than the expected transcription decay factor Kt, indicating that RPol II binding quantities reached steady state levels more rapidly in the transcript region (downstream of the TSS) than in the promoter (upstream) region.
Similar(39)
If so, we would expect transcription of the lytic switch gene, ORF50, to be reduced without ORF75c, and that of latency genes such as ORF73 [12] to be relatively preserved.
We expect transcription factor activities to peak in different phases according to their cellular function.
We would expect transcription to initiate at the transcription start site in the 5' LTR (roughly halfway into the LTR sequence [ 20]) and terminate in the 3' LTR.
We expect transcription related MARs to be dynamic and dependent on the transcription profile of the cell in question, although it remains to be firmly established.
DOI: http://dx.doi.org/10.7554/eLife.05701.017 If the Gac/Rsm pathway was involved in PARA-mediated H1-T6SS activation, we would expect transcription of its associated sRNA molecules to be elevated in cells co-cultivated with B. thai.
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