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The idea is simple: suppose that two places are rich in surrogate content (that is, in the total expected coverage of surrogates in them).
Nucleation is said to be progressive when the expected coverage of a site by growth is at least 20 times greater than the coverage of the same site by the act of nucleation.
For instance, typically, two types of targets are used: (i) a level of representation for the expected coverage of each surrogate (that is, the expected or average number of occurrences of the surrgate) within a conservation area network (CAN); and (ii) these representation targets along with the maximum area of land that can be put under a conservation plan.
Figure 2 summarizes the extent to which the sequencing of the RRLs resulted in higher than expected coverage of a small fraction of the genome.
The t7 phage metagenomic data was quality trimmed using a Phred [39], [40] Q20 score and the reads were assembled using Velvet 1.0.05 [41] with a K-mer length of 37, expected coverage of 25 and a coverage cutoff of 2, which produced assemblies containing the longest contigs.
Excluding coagulase-negative staphylococci increased the expected coverage of most beta-lactams, except for third generation cephalosporins.
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Expect coverage of the 43rd meeting of the forum to be peppered with references to Thomas Mann, who put Davos on the map with his book The Magic Mountain.
(a) Curves of expected coverage, upper bound of coverage; (b) relationship of the expected coverage and the coverage improvement.
The selected assembly parameters used an expected coverage value of 40X with all other settings remaining at default values.
We use a hierarchical statistical model to describe the expected coverage distribution of k-mers resulting from library preparation and sequencing as follows.
However, the metrics of expected coverage and depth of coverage may be argued to not be appropriate for all metagenomics experiments.
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