Sentence examples for existing alignments of from inspiring English sources

PAGAN also implements a guided placement algorithm that can align shorter sequence fragments into existing alignments of full-length sequences.

We added the new pseudoscorpion sequences to our existing alignments of mt genome sequences of chelicerates.

In eastern Utah the route used the existing alignment of US-50.

When this portion of I-495 was completed in 1982, the state also designated the existing alignment of Route 25 between Route 24 and the I-195 interchange in Wareham as I-495.

In addition to the alignment, tools exist to improve the quality of an existing alignment, for example, with local indel realignment.

Although the general approach seems relatively straightforward, many details remain to be resolved in this ongoing project, including how best to splice the resulting alignments of gene clusters into a whole-genome sequence alignment so as to retain the existing alignments outside of gene clusters.

In this article, we focus on the extension of existing alignments with new sequences and phylogenetic placement of sequences.

Extension of existing alignments with new sequences avoids these problems and guarantees that the relative alignment of reference sequences is not changed.

Here, we outline a new general-purpose method for phylogeny-aware alignment of sequence graphs and apply it to phylogenetic extension of existing alignments.

Because new sequences are aligned to the same length as the template alignment, newly acquired sequences can be analyzed in the context of existing alignments which may have been developed through costly processes such as manual alignment.

In this article, we focus on one specific application for the new method that has no satisfactory previous solution, the phylogeny-aware extension of existing alignments with new data.