Sentence examples for existing alignment from inspiring English sources

If gaps were inserted into the existing alignment to align the new sequence in step 3, then corresponding gaps are inserted in the other new sequences in this step.

For each node, If all the children of the node are in the existing alignment or already aligned to the existing alignment, then no alignment calculation is necessary.

To achieve this, the aligned columns within an existing alignment are viewed as a single entity and the score between two columns is essentially the sum of all pairwise scores.

In addition to the alignment, tools exist to improve the quality of an existing alignment, for example, with local indel realignment.

PAGAN can reconstruct ancestral sequences for an existing alignment and then extend that by aligning new sequences against the extant or inferred ancestral sequences.

Most likely, for such analyses, we should not apply profile profile or profile sequence alignment, which converts an existing alignment to a profile and then aligns it with new sequences.

Experimental results in comparison with most existing alignment-free bio-cryptosystems using the publicly-available databases show the validity of the proposed scheme.

Evaluation of the proposed scheme over FVC2002 DB1, DB2 and DB3 shows that the new method demonstrates satisfactory performance compared to the existing alignment-free cancelable template schemes.

As in existing alignment-free methods, we compared the (relative) frequencies of these spaced words using standard distance measures [ 24].

However, the existing alignment-free methods are all based on unsupervised learning strategy (e.g., PCA or hierarchical clustering).

S paced words and kmacs again produced better results than the existing alignment-free methods that we evaluated.