Sentence examples for exhaustive blast from inspiring English sources
Using Smal1 RAYT sequence as query, exhaustive BLAST search was performed to identify RAYT homologs in other prokaryotic organisms.
Mas homologs in the M. smegmatis genome, which was not covered by the NCBI database, were identified by exhaustive BLAST querying of the TIGR proteome.
We have therefore conducted exhaustive BLAST searches of publicly available sequence data (see Methods) to asses the presence and conservation of CSL family members in fungi.
A paralogous HoxD14 gene was not identified from BAC_231C24, despite exhaustive Blast searches on both the assembly and the raw 454 sequence reads.
Conversely, exhaustive BLAST searches directed against a wide phylogenetic range of eukaryotic unicellular and multicellular draft or complete genomes (more than 270) did not return any positive hits (see Additional file 2 for a complete list of eukaryotic genomes searched).
Using the cloned PLDs from Arabidopsis and other organisms we conducted exhaustive BLAST searches of the Arabidopsis sequences available from GenBank and found 12 genes from the eukaryotic PC-PLD family, five of them not yet recorded in the literature.
Over 400 toxin sequences were identified with an exhaustive PSI-Blast search.
Exhaustive PSI-BLAST search starting from COG1343 proteins identified proteins of COG3512 as homologs of COG1343 such that these COGs could be unified in a single superfamily.
Despite identifying a diverse group of Ago and piwi-like sequence homologs, no sequence representing eIF4E was detected using exhaustive PSI-BLAST searches against the non-redundant sequence database.
To this end, we first used representatives of all known TA protein families and the new candidates identified with the first approach as queries for exhaustive PSI-BLAST [ 39] searches.
We performed an exhaustive PSI-BLAST search [ 15, 16] using the sequence of the N-terminal FtsZ-like domain of Huta_2051 as the initial query to identify all representatives of the same protein family.
