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To that end, one important feature of Vhub is its capacity to execute simulation, modeling, and data analysis programs within the user's web browser while the program being executed runs on remote computing resources, negating the need for the user to install software on their local machine.
In the next subsection, we will execute simulation to investigate the characteristics of predicted fate patterns of 48 genotypes, in particular, four genotypes leading to the unstable fate pattern, and to evaluate two rules employed to the VPC fate model by comparing with three simulation targets (i.e., JA, ST, and STA) as shown in Figure 1(b).
Two additional libraries are included: libSedML-Runner, which allows to schedule and execute simulation experiments encoded in SED-ML files using either RoadRunner (http://roadrunner.sf.net/, [ 15]) or a variety of simulators exposed through the Systems Biology Workbench (SBW, [ 16]), such as iBioSim [ 17] and COPASI [ 18].
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For more efficient computation of seismic cycles, we execute simulations with H-matrices on massively parallel computers.
This paper focuses on how to combine the kernel re-entering and discrete-event simulation methodologies to execute simulations quickly.
In SimSphere-SOA, an Application Programming Interface (API) is also provided to execute simulations that can be publicly consumed.
Beginning MATLAB users can use the SimTB graphical user interface (GUI) to design and execute simulations while experienced users can write batch scripts to automate and customize this process.
This is increasingly available, both in the form of application support for end-users wishing to execute simulations encoded in SED-ML, and as software libraries to facilitate the uptake of SED-ML support amongst application developers.
To evaluate the proposed prognostics strategy, we have executed simulation experiments with Tennessee Eastman (TE) process.
Based on simulation model formal specification, the abstract simulation algorithm is given and SCSL virtual machine, which is capable of automatically interpreting and executing simulation model represented by SCSL, is designed.
generations where the discovered available resources are automatically configured to run assigned pieces of simulation (execute simulator) in parallel.
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