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We also provided the Excel template for users to adapt this library to their own instrument features and parameters and export customized libraries.
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The LRE Analyzer provides Excel templates for manual data import (Figure 6), along with support for importing data from Applied Biosystems 7500 and Stratagene Mx3000p instruments (support for additional platforms could be added depending on demand and available resources).
An ANOVA was performed within Partek to obtain multiple test corrected p-values using the false discovery rate method at the 0.05 significance level and was combined with fold change values, signal confidence (above background), and call consistency (as a percent) calculated using custom Excel templates for each comparison of interest.
Extracted data were entered into an Excel template developed for a previous review.
This necessitated manual background subtraction as implemented in the Excel template used for LRE quantification (additional file 2).
A MIAME compliant [ 11] excel template is provided for user download to ensure the data remains compliant.
Additional data file 2 contains the MS Excel templates used for the data analysis conducted in this study.
The data were entered into Microsoft excel template and exported to Stata for analysis.
The data from the telephone survey were entered into Microsoft excel template and exported to Stata for analysis.
The values in the copied SQDG Microsoft Excel template sheet were subsequently adjusted for the novel GlcADG adduct ions as well as observed GlcADG fragmentations.
An Epi Info template for data entry and an Excel template to summarize results have been added to facilitate data analysis.
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