Amino acid frequencies were calculated for each of the first 25 N-terminal positions, based on the set of 247 non-plant training examples used by Maurer-Stroh et al [ 21], and on all 587 plant examples predicted to be myristoylated by the final plant-specific HMM.
Imputation is used on both the training set and on examples being predicted by AZOrange models.
Note that if in (15b) we took the presupposition of the definite "the knave" to include a uniqueness or maximality requirement, i.e., that there was no more than one knave, then the overall presupposition of the example as predicted by the Karttunen (1974) model, and indeed by Strong Kleene, would no longer be trivial.
For example, as predicted by one version of the plant stress hypothesis [7], boring insect guilds respond positively to drought stress, as do phloem-feeding insects when drought stress is intermittent [8], effects that occur because of enhanced N availability in drought-stressed plants.
For example, as predicted by the theory, billionaires have significantly more male offspring compared with the rest of the population (Cameron and Dalerum 2009).
Previous longitudinal analyses had suggested that progression may be more clinically relevant: the development of radiographic disc space narrowing over 9 years of follow-up, for example, was predicted by the presence at baseline of low back pain in the Chingford study.
Differences between them are: the splitting criteria, that is, the Gini Index instead of mean squared error, and the number of variables recommended for each split, (m try = ); also, the class of an unseen example is predicted by majority vote, that is, the algorithm counts the number of votes (one vote per decision tree) and assigns the class with the highest number of votes (Liaw, 2013).
An example flux distribution predicted by IOMA following the knockout of an enzyme in the non-oxidative branch of the PPP, talB (Transaldolase B), is shown in Figure 4.
Of these novel positive examples, 339 non-coding examples (85%) and 1955 coding examples (89%) are correctly predicted by our classifier at the default threshold.
