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Typical examples of databases include employee records and product catalogs.
Some examples of databases built on this model include Voldemort [16] or Redis [17]. 2.
Examples of databases include Copernicus 21 Sciences Knowledge database, Taiwan Amphibious Reptile video database, Taiwan Ecology Notebook database, etc.
STRING [12], HiMAP [13] and Bioverse [14] are examples of databases integrating evidence for gene interactions in human and other species.
Medline, Cinahl, Embase, Cochrane, PEDro are examples of databases used for searching relevant literature.
O-GLYCBASE (5) and Phosphso.ELM (6) are some examples of databases associated with specific classes of PTMs.
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Examples of database identifiers used include Genbank/EMBL/DDBJ accessions and locus tags, UniGene accessions, RefSeq accessions, IPI accessions, NCBI gi numbers and IDs unique to a sequencing center or organism-specific database.
Figure 5 provides examples of database searches and search outputs from a web implementation of BraMRs.
The COMBREX database, which holds and curates this knowledge, is discussed, and examples of database queries that have to do with antibiotics resistance and gene essentiality and help guide experiments are given.
Examples of database search methods directly reporting P- or E-values include, but are not limited to, Mascot [ 8], Sonar [ 9], InsPecT [ 10], OMSSA [ 11], and X!Tandem [ 12].
Bioinformatics is undergoing explosive growth with the addition, for example, of databases that catalog interactions between proteins, of databases that track the evolution of genes, and of systems biology databases which contain models of all aspects of organisms.
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