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Numerous examples and datasets, including the ones in Figure 1, are included in the package, to guide the users' first steps.
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Availability and implementation: An R package containing examples and sample datasets is available at Bioconductor.
Availability: Source code implemented in R, as well as text files containing examples and sample datasets are available at http://www.bios.unc.edu/research/genomic_software/DiNAMIC.unc.edu/research/genomic_software/DiNAMIC
The implementation (i.e., example code) and datasets are available at http://www.egr.msu.edu/changroup/Protocols/NCI-DREAM7.html.
An example pathway and dataset are used to demonstrate the functionality of the WikiPathways app and how they can be combined and used together with other apps.
Further information about the algorithms, the filters, their parameters, some typical application examples and real biological datasets are offered online in the Supplementary Material section.
The model codes and example datasets are provided in the Supplementary Materials online.
The performances of both algorithms are assessed on toy examples and a mining dataset.
There is no obvious overlap between two turns in the examples and in the dataset.
In addition, we would like to see descriptions of cohorts and examples of datasets available for clinical epidemiological research, since if there is an important research question, it is essential to find and access the right data and to carry out the study promptly.
To guide the user on how to use the software, a detailed tutorial, help windows for specific features and example datasets from different case/control and wild-type/knockout studies are provided on the web page at http://www.repexplore.tk.tk
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