For example, line notations like Daylight SMILES [1] do not offer coordinate information, while crystallographic or quantum mechanical formats frequently do not store chemical bonding data.
Note that, for example, the notation i-i+3 refers to pairs of residues which are separated in the amino acid sequence by two intervening residues.
Take for example the notation in Principle 18 of "pain + reflection = progress," the Christian-like maxim in Principle 122 to "teach your people to fish rather than give them fish" and the last principle, which lets you know something your mother told you: "Don't try to please everyone".
For example, algebraic notation requires replacing visual symbols with mathematical concepts.
For example, the notation [*H2]= encodes a molecule in which one atom with two adjacent hydrogen atoms is connected by a double bond to another atom, which has no further neighbor atoms.
For example, the notation 'M184M/V' means that viruses with both ATG (M) and GTG (V) were detected at position 184.
For example, the notation M/D/3/20 indicates a queueing system in which arrival process is Markovian (inter-arrival times are exponentially distributed); service times are deterministic; there are three servers; system capacity is 20; and service discipline is FCFS.
We created a transcription guide [Additional file 10] with examples of notation preferences, particularly for inaudible sections of audio files and conversations with emotional content [ 45].
For example, the electron notation of Phosphorus is 1s2 2s2 2p6 3s2 3p3, while the noble gas notation is [Ne] 3s2 3s2.
