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A celebrated 1997 paper by Juan M. Maldacena of the Institute for Advanced Study describes nature as a kind of hologram, in which the information about what happens inside a volume of three-dimensional space, for example, is encoded in quantum equations on its two-dimensional boundary, the way a 3-D image is encoded on the face of your bank card.
The results suggest that chosen value, for example, is encoded in the LFP amplitude in a specific time window (e.g. around 400 ms where PC2 peaks, indicative of the latency of the underlying waveform), rather than, say, the overall peak of the evoked LFP.
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The recordings, taken from the brains of people awaiting surgery for epilepsy, suggest that new memories of even abstract facts — an Italian verb, for example — are encoded in a brain-cell firing sequence that also contains information about what else was happening during and just before the memory was formed, whether a tropical daydream or frustration with the Mets.
The above example was encoded and solved using GAMS/CPLEX [65].
Most commercial data mining programs accept data pre-formatted in the form of a table, with each example being encoded as a linear feature vector.
The plant defensins, for example, are encoded by a multigene family with small (45 54 residue) cysteine-rich protein products.
In two of the cases, the products function in a different compartment from where they are encoded (for example, being encoded in the host genome but putatively functioning in a symbiont or plastid) and establishment of functionality will require the demonstration both that the mRNA is translated and that the protein products are targeted to the appropriate compartment (the symbiont or plastid).
The redundant codons cause amino acids to be represented unevenly; for example, methionine is encoded just once within NNN, whilst arginine is encoded six times.
For example, selenocysteine is encoded by stop codon and SECIS element.
Pyrrolysine and selenocysteine are encoded via variant codons; for example, selenocysteine is encoded by stop codon and SECIS element.
For example, FAD2 is encoded by three distinct family members in soybean [ 29, 38] and by four members in cotton [ 31- 34].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com