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For example, chromosomes 1, 2 and 3 contained significantly more distributions than the rest chromosomes.
For example, chromosomes in the human genome each make up only 2-82-8% totalotal genome size.
For example, chromosomes 5 and 6 of sample C47 both give trisomic patterns but negative log ratios.
Alternative formats (for example, chromosomes displayed horizontally, one above the other) and options to display only CNVs or only SNPs are also available.
For example, chromosomes of species in the genus Sulfolobus are replicated from three origins (Lundgren et al., 2004; Robinson et al., 2004, 2007).
Coordinate systems are used to define the entities that a DAS server provides or annotates, for example, chromosomes, genes, protein sequences or protein structures (Prlić et al., 2007).
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Recurrent chromosomal alterations typical of retinoblastoma, for example, chromosome 1q and 6p gain and 16q loss were also a feature of this group, and clinically they were characterised by an invasive pattern of tumour growth.
The chromosomal distribution was significantly non-random (P < 0.05); for example, chromosome 2 (2L & 2R), 3 (3L & 3R) and X contained a mass of young duplicate genes (Additional file 2: Figure S2).
This will enable both benchmarking of experimental and computational approaches and better interpretation of what each data type (for example, chromosome conformation capture data on the one hand and imaging on the other hand) reveals about the structure, dynamics and cell-to-cell variation in folding of chromosomes.
In mammals, for example, chromosome structure predicts the sex of the adult animal.
For example, chromosome 12 is mostly gained as a whole chromosome or as an isochromosome, whilst chromosome 1 and 17 are gained via structural rearrangements such as intra-chromosomal duplication and unbalanced translocations involving other chromosomes in addition to trisomy and isochromosome formation (Amps et al., 2011; Baker et al., 2007).
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